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This walkthrough was created using Build 14 Beta 01 Patch 6 it may differ from other versions of the game.
SAVE HERE I have put this at a couple of places where you are about to have to make major choices. If you follow this advice, should you want to make a different choice, it should be easy to use this save and continue.
A complete list of Side Quests is given here: Side Quests
EXCEPT --- Hard Labors of an Assassin side quest -- which is NOT available in this Story
Story starts Kralendijk Port, Bonaire – On jetty a crewmember runs up and talks to you – QB Update
With Cheats on - (Choose 1st option in dialogue to start story – other options for going direct to points further on in the storyline)
Sail to Playa de Sabana, Cuba – on beach Baltasar Salgada runs up and talks to you - ( he wants 600 ale minimum – or he will leave & quest book will close - Story Over ) – Fight – Spanish soldiers arrive and talk to you – transported to prison – Spanish officer talks to you.
Transported to Havana Residence – Spanish officer talks to you – Go and talk to Vice-Admiral Salvadore Benavides – given mission with 1 Month Time limit – QB Update
Go to shipyard – talk to Capt. Damski – Go to Port – talk to Chico Cois at end of jetty – QB Update
Sail to Grand Cayman – on Grand Cayman beach Chico Cios talks to you – QB Update
Go to town jungle gate – go to house just outside gate – enter – Chico Cois talks to you – Transported to outside house - Dominico Cuellar walks up and talks to you – follow him inside house – Dominico talks to you – gives you item – talks to you again – Chico Cois talks to you – gives you item – QB Update
Go to just inside port gate – Harold Flesher appears – follow and kill him – QB Update
Go back to Dominico’s house – talk to Dominico – QB Update.
Sail to Havana, Cuba – go to Residence – talk to Vice-Admiral Benavides
Given new mission with 2 month time limit – QB Update
****Chico Cois now becomes Officer/Passenger – keep him alive he is important – he gives you items during the storyline
( Hint:- If you can get a map of Speightstown dungeon )
SAVE HERE
Sail to Barbados – search Speightstown for missing spy Pelagius Lizarraga.
Dungeon entrances are
1) By the shipyard
2) To the left of the jetty – you have to swim
3) Trapdoor in front of 1st house on right inside port gate
WARNING - Abbey of Maltese Knights
In dungeon watch out for entrances to Abbey of Maltese Knights – don’t go there (if you do turn round and go straight back out) – unless you enjoy fighting undead monks etc. there are lots of them.
1) Down steps to 1st room – through arch in front of you to your right – then left down passage and steps to next room - spy Pelagius Lizarraga is in alcove to your left.
2) & 3) In 1st room go through passage straight ahead – in 2nd room spy Pelagius Lizarraga is in alcove on opposite side of room.
Find Pelagius Lizarraga – talk to him ( be careful he is in front of an entrance to Abbey of Maltese Knights ) – QB Update
Take Pelagius Lizarraga back to your ship.
In Speightstown centre – English officer challenges you over Pelagius – Fight – England Now Hostile.
(if you are moored in Speightstown Port – the fort will now fire at you)
(****If you exit the dungeon through the sewer to the Port and don’t go through Speightstown centre ( not fight English soldiers ) then England will not become Hostile.
Go back to ship & Sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides – gives you next mission with 1 month time limit – QB Update – Pelagius leaves.
Exit Residence – outside Chico Cois talks to you – gives you item – QB Update
Sail to Hopital, Hispaniola
Go to Hopital Fort – (using entrance from town) – Enter fort – go across 1st courtyard to large gates on your left – 2nd courtyard go through large gates on your left – in 3rd courtyard Gabriel Brugera is French Soldier standing at far end – kill him – QB Update.
Exit Fort & sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides – gives you next mission – QB Update
Sail to Marigot, Isla de San Martin.
Find townhall - opposite church – wait till night then go to house behind townhall – through arch on right and up steps – enter – talk to Tello Basadre – QB Update
SAVE HERE
Sail to St Pierre, Martinique – 9 days time limit to get there.
On St Pierre jetty - QB Update – go and talk to tavernkeeper – talk business – ask if anyone from La Fougueuse in the tavern – then Chico Cois talks to you – Exit tavern - Chico Cois talks to you.
Transported to jetty at night – soldiers hostile – Go up steps into town – at 2nd town gate Quest Movie – transported to inside town hall – search room and take document – QB Update
Go to window – transported to Capt. Cabin - Chico Cois talks to you – transported to Port next day – QB Update - Chico Cois talks to you – transported to later in the day - Chico Cois talks to you again – French Captain on jetty – follow French Captain – then autowalk - Chico Cois talks to you – transported to town centre - Chico Cois talks to you – autowalk – French Captain appears - Explosion – autowalk – transported into church – QB Update
Exit Church – autowalk – QB Update
Go through jungle to Octopus Bay – Chico Cois waiting on beach – talk to him – transported to Capt. Cabin - Chico Cois talks to you – QB Update – Transported to Sea.
Sail to Sao Jorge, Concepcion – on Sao Jorge jetty Chico Cois talks to you.
SAVE HERE
Go to tavern – enter – transported to table - Chico Cois talks to you – transported to your ship’s deck - Chico Cois talks to you & gives you items – Quest Movie – Transported to French Ship’s deck - Weapons Changed
(**** Try to sneak past French soldiers without getting hit or the access to the lower decks will be locked.)
Find access to lower decks – go to upper cannons deck gunpowder storage – timebomb automatically removed from inventory – go through main cannons deck to cargo hold - find gunpowder storage - timebomb automatically removed from inventory.
Transported back to own ship – Automatically set sail – watch explosion & French Ship sink – QB Update
Sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides – gives you next mission – QB Update
This walkthrough assumes that you accept each job given to you – there are lots of options in the dialogues to reject the jobs - so before meeting people you should do a SAVE.
Sail to La Tortue, Tortuga – go to tavern – talk to Vassal Bethune – QB Update
Sail to Port Royale, Jamaica – on entering the part of town with the prison in it Vassel Bethune talks to you & walks away – follow him – Enter house – Talk to Mateus Santos.
Mateus Santos – makes you an offer - pay careful attention to what he says and the conditions he makes. ( BAD things will happen to you if you don’t follow the rules).
There are time limits - 3 months to do the job - you can take as long as you like to go back to Santos to collect the reward for the jobs he gives you
BUT each job you do will lower your reputation by one level ( if your reputation gets too bad, merchants / storekeepers will not talk to you or sell you goods e.g. Food, Rum etc.)
If you accept 1st job – QB Update - sail to Boca de Yuman, Hispaniola – talk to Ambroz Bricenos on beach – kill him – Yes / No - QB Update
Sail to Port Royale, Jamaica – go and talk to Mateus Santos - gives you reward – offers you next job – QB Update
Sail to Bridgetown, Barbados
Go to House of Geffrey Bampfylde (between shipyard and tavern)
On entering automatically walk up to Geffrey Bampfylde – he talks to you – Bucho talks to you - Kill Bucho - Geffrey Bampfylde talks to you. - Kill him - Yes / No – QB Update
Sail to Port Royale, Jamaica – go and talk to Mateus Santos - gives you reward – offers you next job – QB Update
Sail to Grand Turk, San Salvador – on Grand Turk jetty talk to self – search for Pepin Bertillion he is wandering around the Port Area - Talk to Pepin Bertillon – Kill him - Yes / No – QB Update
Sail to Port Royale, Jamaica – go and talk to Mateus Santos - gives you reward – offers you next job – QB Update
Sail to Sao Jorge, Concepcion - Go to House of Amerigo Vieira ( next to townhall )
On entering Automatically walk up to Amerigo Vieira – he talks to you - Kill him OR Hire him as officer – ( if you hire him Mateus Santos will not know ) OR let him go – QB Update
Sail to Port Royale, Jamaica – go and talk to Mateus Santos - gives you reward – offers you next job – QB Update
Sail to Pointe a Pitre, Guadeloupe - Go to Church
SAVE HERE
Talk to Vito Leone – long talk - Kill him – Yes / No - QB Update ( Try killing Vito Leone then go back to Mateus Santos and see what happens ) - LOL
Sail to Port Royale, Jamaica – go to House of Mateus Santos
Enter – Automatically walk to Mateus Santos - he talks to you & disappears - fight Bodyguards behind you.
Go into study - Kill Mateus Santos – given items - Check your items & Quest Items ( F2 ) should have - Santos’ Ring, - Keys & 2 Books
Keys labelled - Study – Secret-ary – Alas Poor Yorick
Exit Study by Secret Passage – Talk to Camille Leone – Go through prison -fight more of Santos’ men – talk to Thomas the Terror – Go back to Camille Leone – Go to prison cell opposite skull on floor – Transported to Church - talk to Vito Leone – QB Update
Sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides – gives you next mission – QB Update
Sail to Santo Domingo, Hispaniola – go to town hall - talk to governor – QB Update
Sail to Cap Francos, Hispaniola – go into jungle – 1st jungle section turn left – go through cavern – then along cliff-top path to Playa del Muerta beach – Auto-walk down beach – talk to middle soldier lying on beach –QB Update
Sail to Santo Domingo, Hispaniola – go to town hall - talk to governor – QB Update
Sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides – then Nicholas Butcher talks to you – then Vice-Admiral Benavides – QB Update - Nicholas Butcher joins you
Sail to Pointe a Pitre, Guadeloupe – go to Plantation outside Pointe a Pitre – talk to Renouart Baumont – he is walking around Plantation ( do not go into the house) – then Nicholas Butcher talks to you – QB Update
Sail to Charlestown, Nevis
SAVE HERE
Go to Brothel and talk to Lady Gaga – QB Update
Exit Brothel - Nicholas Butcher talks to you – leaves – comes back and talks to you – Chico Cois talks to you – transported to outside tavern – Nicholas Butcher talks to you & leaves – Lady Gaga walks towards you
Use Ether bottle
If you kill her - English soldier talks to you – Game Over
If you fail to knock her out – QB Update - Quest Failed
Use Ether Bottle – then talk to her – pick 1st dialogue option to pick her pocket and take keys – go and find Nicholas Butcher – go into house on his right – search – automatically receive item - Nicholas Butcher talks to you – QB Update
(*****If you attack Lady Gaga at night her house will not be open – check where Nicholas Butcher is then go to tavern and come back the next day in daytime ( it will then be open ))
Sail to Curacao – talk to Willemstad tavern keeper – ask about Roche Brasiliano – QB Update
Go and find village in jungle – in 1st jungle screen on other side of Windmill – on entering village – Autowalk to Nicholas Butcher – he talks to you – Auto turn right - Nicholas Butcher talks to you again
Go to village tavern – talk to Hans Delorme - then Nicholas Butcher talks to you – Transported outside at night - Nicholas Butcher talks to you – Kill guards – Enter house – Talk to Cesario De Rosas hiding upstairs
Exit house - Nicholas Butcher talks to you – he leaves with Cesario De Rosas – fight Roche’s Pirates – QB Update
Go back to ship and search for Roche’s ship.
Roche Brasiliano’s ship is generated at a random island – so you have to check all the islands until you find it ( except Cuba, Curacao, Mona & Petit Tabac ).
You are looking for a pirate ship with full stats that is there in addition to the normal number of ships. ( usually 6 ships – so you are looking for an island with 7 ships).
Sink or capture Roche’s ship – kill Roche Brasiliano – QB Update
Sail to Havana, Cuba – on Land Ho – transported to Havana Fort
Auto-run to Roche Brasiliano – he talks to you – Auto-run to Vice-Admiral Benavides – he talks to you – Governor walks up and talks to you & gives you quest item - Vice-Admiral Benavides talks to you again – transported to jetty.
30 days later - QB Update & Header closes - Return to Havana, Cuba
Go and talk to Vice-Admiral Benavides – gives you next mission – QB Update
Sail to St Johns, Antigua – find Pelagius Lizarraga up in fort to the right of jetty – talk to him
Go to Naval HQ and talk to Port Admiral – ask if he has any tasks for you – ask for real task – accept job of sinking the Belleville off Guadeloupe – QB Update
Sail to Guadeloupe – fight the "Belleville" – Sink or Capture – kill Captain – QB Update
Sail to St Johns, Antigua - Go and talk to Port Admiral – Port Admiral leaves – Jeremy Tripper talks to you – QB Update
Sail to Cozumel – on beach Jeremy Tripper runs up and talks to you – go into jungle & find camp at temple – 1st jungle section straight ahead – 2nd section go left – walk up to temple – near temple Jeremy Tripper talks to you then runs to temple – follow him – Fight French soldiers - Jeremy Tripper talks to you.
Transported back to ship at sea – Fight French Warship – Sink it or Kill Captain – QB Update
Sail to St Johns, Antigua – on jetty Pelagius Lizarraga runs up and talks to you
Go and talk to Port Admiral – QB Update & Quest Item
Go and talk to Wilfred Larner on jetty
Sail to Isla Mona – on beach Wilfred Larner talks to you & leaves – then Chico Cois talks to you & leaves
Go to Lighthouse - talk to Port Administrator – Transported to tavern sitting at table - talk to self – Exit tavern English soldier talks to you – go into jungle
Enter Commanders house – talk to Wilfred Burman – Exit Commanders house - Chico Cois talks to you – Transported back to tavern - Chico Cois talks to you – transported inside warehouse receive Quest Items – Weapons Changed
SAVE HERE
Exit warehouse – 1st jungle screen go right – (try to sneak past soldiers) – 2nd screen along path to mine. Enter mine and find Fort entrance – enter Fort – go to roof – find 2 very large cannons – walk behind each cannon – time bomb placed automatically – Quest Movie
Transported to Capt Cabin - Chico Cois talks to you – transported to sea – QB Update
Sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides – gives you next mission – QB Update
Sail to Cozumel – on Land Ho arrive in middle of battle between French and English Ships
Capture the "La Couronne" – Kill Captain – QB Update
Sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides - soldier interrupts & talks to Benavides - transported to Smugglers Fort – Fight Dutch Soldiers - ( Keep Padilla Alive & don’t hit Spanish Soldiers - or they will attack you ) - Enrique Padilla talks to you - QB Update
Go to Playa de Sabana beach fight Dutch – Padilla talks to you - QB Update ( "La Couronne" auto-exchanged for Xebec)
Transported to Vice-Admiral Benavides’ Residence –talk to Benavides – transported to Town Hall – Auto-walk to Benavides – talks to you – QB Update & quest Item
Sail to Bonaire – on Land Ho transported to ship deck – Chico Cois talks to you – transported to Capt Cabin - Chico Cois talks to you – transported to jungle - Chico Cois talks to you.
Go and talk to Berend de Voor – Fight Dutch Soldiers – Berend de Voor talks to you –Transported to Ship Deck - Berend de Voor talks to you - Transported to Capt Cabin - Chico Cois talks to you – Transported to Shore – talk to self – watch Berend de Voor escape – Transported to Sea – QB Update
Sail to Oranjestad, Aruba
Go to Indian village – go into house & talk to Arawak chief – transported to jungle Indian village – talk to chief – Quest item removed – Transported to sea - QB Update
Sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides says come back in a month – QB Update
30 days later QB Update - Go and talk to Vice-Admiral Benavides – QB Update & Quest Item
Sail with Fleet to Aruba – on Land Ho – transported to Indian village – Indian chief talks to you – Quest Item removed – Transported to jungle outside Oranjestad
Go and talk to Enrique Padilla - Watch Battle ( may need to fight Dutch – to keep Padilla alive )
At end of Battle follow Padilla into Oranjestad – watch soldier kill civilian – auto-walk & talk to Padilla – Transported to Sea – QB Update
Sail to Havana, Cuba
Go and talk to Vice-Admiral Benavides – QB update
Sail to San Juan, Puerto Rico
Go and find Nicholas Butcher – walking around in the part of the town with the Church & Town Hall - talk to him – QB Update
Sail to Pirate Settlement, Nevis
Go to Pirate Settlement tavern – talk to Andrew Parson – Nicholas Butcher talks to you – QB Update
Sail to Sao Jorge, Concepcion
Go and talk to tavernkeeper – ask about Bartolomeu – then Nicholas Butcher talks to you
Exit tavern – Nicholas Butcher talks to you – Quest Movie - transported to Ship deck – Chico Cois talks to you – Auto-walk & talk to Emilio Soares – then Chico Cois talks to you – transported to sea – QB Update
Sail to Havana, Cuba
On jetty Emilio Soares talks to you – then Nicholas Butcher – transported to Vice-Admiral Benavides’ Residence – talk to him – Exit residence – Nicholas Butcher talks to you - QB Update
Sail to Puerto la Cruz, Eleuthera
Go to Town Hall – talk to Governor (offer services – talk business ) – Transported outside – Nicholas Butcher talks to you – QB Update
Go to Alice Town – Through jungle - ( jungle 1st section{plantation} go right – 2nd left – 3rd Straight ahead – 4th right )
In Alice Town find soldier William Cotter – walking around – talk to him – transported to Night-time – Nicholas Butcher talks to you
Watch Roxanne Lalliere leave tavern – run after her and talk to her – Fight – Nicholas Butcher talks to you – Transported to Puerto la Cruz Town Hall – talk to Governor – transported to Prison in Fort – Roxanne talks to you – Spanish Officer talks to you – then Nicholas Butcher talks to you
Transported to Tavern – talk to self ( thinking ) – transported to outside Fort at night – talk to self – Search fort – Go to prison at bottom of stairs
SAVE HERE
Enter Prison - Meet Bartolomeu talking to Roxanne – talk to him
CHOICE - KILL Him OR be FRIENDS with him ( see below )
Fight – Roxanne talks to you – Padilla talks to you – transported to Puerto la Cruz – Padilla talks to you – QB Update
Sail to Havana, Cuba
On jetty – Padilla talks to you – go to Town Hall ( not Benavides Residence ) – Enter – Auto-walk to Vice-Admiral Benavides – he talks to you and gives reward– auto-walk to Governor – he talks to you – gives quest item
Transported to Port – QB Update
THE END OF THE STORY SO FAR
Transported to jungle – Padilla runs up and talks you – Bartolomeu talks – then Padilla – Fight – Bartolomeu talks to you – QB Update
Go to Alice Town – go and talk to Guibert Daudet standing near the jetty – Bartolomeu talks to you - QB Update
Sail to Bahia de San Antonio, Cuba
On beach Bartolomeu talks to you – transported to town – Bartolomeu talks to you
Walk across bridge to prison – talk to Spanish soldier outside – prison opens
Enter – Go and talk to Emilio in cell – Bartolomeu talks to you – Quest Movie
Transported inside Benavides’ Residence – go to main door – Quest item automatically placed – go back upstairs to windows – transported to town – Bartolomeu talks to you – Watch Vice-Admiral Benavides arrive – Explosion
Transported to beach – Roxanne talks to you – Bartolomeu talks to you – QB Update
Sail to Port Royale, Jamaica
On jetty Bartolomeu talks to you – Bartolomeu, Roxanne & Emilio leave - QB Update
( only available if you were Friends with Bartolomeu in The Bartolomeu Trap 
Have Small boat - Sail to Kralendijk, Bonaire – on jetty Berend de Voor runs up and talks to you – transported to Town Hall – talk to Governor – transported to Prison – talk to self. – Weapons Changed
Transported to Town Hall – autowalk and talk to Governor – Berend de Voor talks to Governor – lots of talk between Elting – Governor – Berend de Voor – transported to later in Town Hall – auto-walk and talk to Governor.
Transported to Shore – Dutch soldiers run up and talk to you - Fight lots of sailors ( warning don’t hit Dutch soldiers or they will attack you ) - then Berend de Voor talks to you – QB Update
Go through jungle to Palm Beach – left – right – right
At Palm Beach Berend de Voor talks to you – transported to Ship Deck – Chico Cois talks to you – Fight – Kill Chico ( knocks him out ) – transported to Ship Deck – Chico Cois talks to you.
Transported to Town Hall – auto-walk and talk to Governor – QB Update
Sail to Bahia de San Antonio, Cuba – On beach Chico Cois talks to you and leaves – QB Update
Sail to Port Royale, Jamaica.
( only available if you were Friends with Bartolomeu in The Bartolomeu Trap 
Sail to Port Royale, Jamaica - go to Town Hall – talk to Henry Morgan – transported to tavern – Morgan talks to you – QB Update – (Read QB carefully )
Sail to Vera Cruz ( Cozumel ) – on Land Ho - Transported to Vera Cruz Port – QB Update
Enter town - talk to Emilio Soares – follow him to tavern – enter - transported to table – Bartolomeu talks to you
Transported to town at night – Talk to self - Watch Bartolomeu – Fight soldiers - Bartolomeu talks to you – transported to beach – Bartolomeu talks to you - MOVIE – transported to beach – Bartolomeu talks to you - QB Update
Sail to Cuba - on Land Ho – MOVIE – QB Update
Sail to Port Royale, Jamaica - go to Town Hall – talk to Henry Morgan – Bartolomeu talks to Morgan – QB Update
Sail to Cuba – on Land Ho transported to Morgan’s cabin – talk to Henry Morgan – transported to Bartolomeu’s cabin - Bartolomeu talks to you – transported to beach – Clothes and weapons changed – Bartolomeu talks to you - QB Update
Go through the jungle to Havana – go to Port gates ( with back to them look right – Damski’s house is door facing you )
Talk to Capt Damski – lots of talk between Damski – Elting – Bartolomeu
Transported to town by gallows – Damski talks to you – Go and talk to Captain Villalobos – transported into church – talk to Captain Villalobos – Fight – Bartolomeu walks up and talks to you
Transported to Morgan’s ship deck – Clothes Changed – Henry Morgan talks to you – transported to Morgan’s cabin – Henry Morgan talks to you –transported to later on – auto-walk to Morgan – he talks to you – MOVIE
Transported to top of cliff – pirate runs up – Bartolomeu talks to you – Loading Screen – Bartolomeu runs up and talks to you – Change clothes & Weapons - transported to Spanish Camp – Quest Items – QB Update – READ Questbook Carefully
Kill Spanish Soldiers - When all soldiers killed – QB Update - READ Carefully
Walk behind cannons - Bombs placed behind cannons automatically – Explosions
Loading Screen – Henry Morgan talks to you - transported to Bartolomeu – he talks to you – watch pirate climb ladder – transported to Fort – Fight – Bartolomeu talks to you - transported to Fort roof – Bartolomeu talks to you – follow Bartolomeu – talk to self – Bartolomeu talks to you – run forward and fight soldiers – Pirate talks to you – Bartolomeu talks to you
Watch fight in Fort – Bartolomeu talks to you – Auto-jump – Fight – transported to Captain Caceres – Captain Caceres talks to you – Fight – Henry Morgan talks to you
Transported to Warehouse – Fight – Henry Morgan talks to you – walk to Aztec throne – Henry Morgan talks to you – transported to beach – Henry Morgan talks to you – transported to Sea – QB Update
Sail to Port Royale, Jamaica – on Land Ho – transported to Port Royale Town Hall - talk to Governor – transported to Store – Henry Morgan talks to you – transported to Town – Henry Morgan talks to you – Bartolomeu talks to you – QB Update
THE END OF THE STORY SO FAR